Publications

2023

Akhade, Ajay Suresh, and Naeha Subramanian. 2023. “Cytoplasmic Sensing in Innate Immunity.” In Encyclopedia of Cell Biology (Second Edition), edited by Ralph A. Bradshaw, Gerald W. Hart, and Philip D. Stahl, 624–43. Oxford: Academic Press. https://doi.org/10.1016/B978-0-12-821618-7.00012-2. Cite
Deutsch, Eric W., Juan Antonio Vizcaíno, Andrew R. Jones, Pierre-Alain Binz, Henry Lam, Joshua Klein, Wout Bittremieux, et al. 2023. “Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work.” Journal of Proteome Research. https://doi.org/10.1021/acs.jproteome.2c00637. Cite Download
Deutsch, Eric W, Nuno Bandeira, Yasset Perez-Riverol, Vagisha Sharma, Jeremy J Carver, Luis Mendoza, Deepti J Kundu, et al. 2023. “The ProteomeXchange Consortium at 10 Years: 2023 Update.” Nucleic Acids Research 51 (D1): D1539–48. https://doi.org/10.1093/nar/gkac1040. Cite Download
Hoopmann, Michael R., David D. Shteynberg, Alex Zelter, Michael Riffle, Andrew S. Lyon, David A. Agard, Qing Luan, et al. 2023. “Improved Analysis of Cross-Linking Mass Spectrometry Data with Kojak 2.0, Advanced by Integration into the Trans-Proteomic Pipeline.” Journal of Proteome Research. https://doi.org/10.1021/acs.jproteome.2c00670. Cite
Kertesz-Farkas, Attila, Frank Lawrence Nii Adoquaye Acquaye, Kishankumar Bhimani, Jimmy K. Eng, William E. Fondrie, Charles Grant, Michael R. Hoopmann, et al. 2023. “The Crux Toolkit for Analysis of Bottom-Up Tandem Mass Spectrometry Proteomics Data.” Journal of Proteome Research. https://doi.org/10.1021/acs.jproteome.2c00615. Cite Download
Kwasniewski, Miroslaw, Urszula Korotko, Karolina Chwialkowska, Magdalena Niemira, Jerzy Jaroszewicz, Barbara Sobala-Szczygiel, Beata Puzanowska, et al. 2023. “Implementation of the Web-Based Calculator Estimating Odds Ratio of Severe COVID-19 for Unvaccinated Individuals in a Country with High Coronavirus-Related Death Toll.” Allergy 78 (1): 311–14. https://doi.org/10.1111/all.15524. Cite Download
Saha, Dhurjhoti, Solomon Hailu, Arjan Hada, Junwoo Lee, Jie Luo, Jeff Ranish, Kyle Feola, et al. 2023. “The AT-Hook Is an Evolutionarily Conserved Auto-Regulatory Domain of SWI/SNF Required for Cell Lineage Priming.” Preprint. In Review. https://doi.org/10.21203/rs.3.rs-2429800/v1. Cite Download