Greater Than The Sum

Annual Report 2013 From Our President


 

An Audacious Proposal
for Transforming & Democratizing Healthcare


At ISB, we remain committed to inventing the future of human health, with the ultimate objective of democratizing healthcare in developed and developing countries worldwide. In last year’s annual report, we proposed a digital-age, Framingham-like longitudinal study over 25 years for 100,000 well individuals. Phase 1 of the 100K Wellness Project launched in March 2014 with a group of “100 Pioneers” whose early results have been spectacular. Phases 2-4 will scale the study to 1,000 participants in 2015, 10,000 in 2016 and eventually 100,000.

This year, we want to make another audacious proposal that will leverage the striking response to the 100K study that we’ve received from many leaders at research institutions, medical centers and innovative health systems in the U.S. and abroad who have already initiated strategic partnership discussions with us. Internationally, we envision a franchise-like model with rigorous scientific and security standards and an agreement to aggregate and share data. This will enable seamless coordination across the countries that become early adopters.

The 100K study harnesses ISB’s systems approach to disease and expertise in the integrated analyses of biological data. We first gather the genome sequences of participants and then collect blood, saliva, stool and urine samples every three months in order to measure microbiome diversity in the gut; clinical chemistries that are focused on nutrition; 1,600 blood metabolites; epigenetic (methylation) status of white blood cell DNA; blood organ-specific fingerprints from the brain, heart and liver; selected hormones; ongoing clinical histories, psychological tests, and data from “quantified-self” devices including heart rate, activity, sleep quality, blood pressure, weight, etc. These measurements form a dynamical personalized data cloud for each participant that enables us to study the molecular basis of health and disease. As the study grows, it will help distinguish between those who remain well or improve in health and those who transition into disease. This insight will allow us to construct multiparameter metrics for wellness—a term now defined by fuzzy psychological criteria—and study the initiation and progression of disease.

When integrated with health coaching and medical oversight, these metrics create “actionable outcomes” that allow participants to increase their wellness or to facilitate early transition from disease back to a wellness trajectory. So far, after having analyzed just a few types of data, we’ve found that 100 percent of the 100 Pioneers have multiple actionable possibilities—thus confirming our hypothesis that virtually all individuals will have the potential to improve their wellness and/or avoid disease.

Why ISB

The 100K Wellness Project emerged over the past decade from ISB’s application of systems approaches to the study of disease. What we now term “systems medicine” has reached a tipping point and is changing the practice of medicine through ISB’s many pioneering technologies and systems strategies: identifying disease genes through family genome sequencing, delineating panels of blood proteins that can distinguish benign from cancerous lung nodules, stratifying disease into its distinct subtypes, developing computational approaches to identify new drug target candidates, etc. Also, our faculty have expertise and interest in: genomic, proteomic, metabolomic and physiological assays; single-cell assays that serve as windows into human biology and disease; the microbiome’s influence on health; and big-data analytics and predictive modeling.

The convergence of systems medicine, big data and patient-activated social networks has led to a medicine that is predictive, preventive, personalized and participatory—P4 medicine. P4 is proactive, focused on the individual and wellness, creates virtual dynamical clouds of billions of data points for each patient that can be used to optimize wellness and minimize disease, contends that clinical trials should be done in the context of individuals rather than large populations, and employs patient-activated social networks for crowd sourcing, learning and advocacy. Contemporary medicine is focused almost completely on disease. The 100K study embodies P4 principles and serves as a pilot project for bringing P4 medicine to the U.S. healthcare system and, perhaps, to those of other nations.

The benefits of the 100K initiative are truly staggering. The collected data will reveal actionable possibilities for optimizing wellness and minimizing disease. Creating multiparameter metrics for wellness will quantitatively define such fundamental human aspects such as stress, resilience, energy and physiological versus chronological age. Identifying and treating diseases at the earliest transitions will save billions of healthcare dollars. This project will push essential advancements in technology from mobile applications that can measure, for example, a droplet of blood to the development of a global IT for healthcare.

With the introduction of P4 medicine into the healthcare system, industry will have to rewrite business and clinical plans to remain competitive. A lucrative industry will emerge as bold innovators become the Googles and Microsofts of wellness. And as P4 spreads through developed and underdeveloped nations, the cost savings will enable the P4 practices worldwide that will democratize healthcare.

The Potential for U.S. Leadership

The U.S. can be at the forefront of this transformation by positioning itself as a global innovator through the advancement of science, technology, IT for healthcare (big data) and medicine. This would fundamentally transform the nature of healthcare through the introduction of the concept of wellness as the foundation for medicine of the 21st century, thus fostering innovation and spurring investment in the U.S. economy.

We are building a coalition of like-minded colleagues to successfully engage Congress and the Administration to create a nationally supported 100K Wellness Project. A bipartisan federal initiative would ensure that the U.S. maintain global leadership in P4 medicine. Success will require broad scientific collaborations and partnerships with visionary policy makers who value as a national priority the improved health of our citizens, the concomitant healthcare savings, and the explosion of private industry opportunities.


Dr. Lee Hood, President and Co-Founder of ISB

Greater Than The SumKnowledge Transfer, Biological Discoveries, Big Data Science

Institute for Systems Biology has a dizzying breadth of research projects. But when we talk about what we do, it’s how we do it that matters most. The systems approach that we pioneered and exemplify continues to distinguish our ability to tackle the most complex biological and environmental challenges today. Because of how we apply our hallmark collaborative, cross-disciplinary and integrative approach, our collective success is greater than the sum of the parts. We’ve highlighted some of the headlines from 2013 that celebrate specific milestones, but together attest to ISB’s continued leadership in systems biology. Click on any of the images below to learn more.

LeadershipBoard of Directors, Senior Leadership, Faculty, Principal and Senior Research Scientists & Engineers

Board of Directors

David A. Sabey

Chairman of the board

President
Sabey Corporation & Sabey Construction
Mark Ashida
CEO
Symform
Bill Bowes
Co-Founder
U.S. Venture Partners
Thomas J. Cable
Board Member
Omeros Corporation
Stephen M. Graham
Managing Partner, Seattle Office
Fenwick & West LLP
Leroy Hood, MD, PHD
President and Co-Founder
Institute for Systems Biology
Douglas Howe
President
Touchstone Corporation
Daniel T. Ling
Retired
Corporate Vice President
Microsoft Research
Craig Mundie
Senior Advisor to the CEO
Microsoft
Robert T. Nelson
Co-founder and
Managing Director
ARCH Venture Partners
Roger Perlmutter, MD, PhD
Executive Vice President and President
Merck Research Laboratories
Louis G. Lange, MD, PhD
Senior Advisor
Gilead
Drew Senyei, MD
Managing Director
Enterprise Partners Venture Capital
J. Leighton Read, MD
General Partner Alloy Ventures

Senior Leadership

President and Co-Founder
Senior Vice President and Director
Associate Director
Chief Operating Officer
Vice President for Development
Senior Vice President for Strategic Partnerships and Chief Business Officer

Faculty

John Aitchison, PhD
Nitin Baliga, PhD
Aimée Dudley, PhD
Leroy Hood, MD, PhD
Sui Huang, MD, PhD
Robert Moritz, PhD
Adrian Ozinsky, PhD
Nathan Price, PhD
Jeff Ranish, PhD
Ilya Shmulevich, PhD

Principal Scientist

Kai Wang, PhD

Senior Research Scientists

John Boyle, PhD
Gareth Cromie, PhD
Eric Deutsch, PhD
Richard Gelinas, PhD
Gustavo Glusman, PhD
Nathan Goodman, PhD
Andrew Keller, PhD
Inyoul Lee, PhD
Monica Orellana, PhD
Chris Plaisier, PhD
Shizhen Qin, PhD
David Reiss, PhD
Sheila Reynolds, PhD
Jared Roach, MD, PhD
Lee Rowen, PhD
Arian Smit, PhD
Jennifer Smith, PhD

Senior Research Scientists (continued)

Sergey Stolyar, PhD
Vesteinn Thorsson, PhD
Qiang Tian, PhD
Kathie Walters, PhD
Julian Watts, PhD
Robert West, PhD
Wei Yan, PhD

Senior Research Engineer

Chris Lausted, MS

Senior Software Engineers

Ryan Bressler
Dick Kreisberg
Bill Longabaugh, MS
Hector Rovira

Senior IT Analyst

Kerry Deutsch, PhD

FinancialsFor the Year Ending December 31, 2013

5-Year Overview
Research Operating Expenses vs. Total Revenue

Statement of Activities
Dollars in Thousands

Revenues
$
%
Grants & Contract Revenue
37,449
85.0
Contributions
2,276
5.2
Investment & Other Income
4,330
9.8
Total Revenues
44,055
100.0
Expenditures
$
Research & Other Direct Costs
32,737
Management & General
10,441
Fundraising & Other
193
Total Expenditures
43,371
Increase in Net Assets
684

Balance Sheet
Dollars in Thousands

Assets
$
Cash & Investments
23,714
Other Assets
10,978
Property & Equipment (Net)
12,961
Total Assets
47,653
Liabilities
$
Accounts Payable & Accrued Expenses
18,810
Deferred Revenues
2,981
Notes Payable
7,823
Total Liabilities
29,614
Net Assets
$
Unrestricted Net Assets
375
Temporarily Restricted Net Assets
8,992
Permanently Restricted Net Assets
8,672
Total Net Assets
18,039

ContributorsSpecial thanks to the following believers in the promise of systems biology

Recognition Listing

$100,000+
William K. Bowes, Jr. Foundation
Lee Hood and Valerie Logan
Roger M. Perlmutter
$25,000 - $99,999
Anonymous
Nesholm Family Foundation
The Boeing Company
$10,000 - $24,999
Intellectual Ventures, Inc.
M.J. Murdock Charitable Trust
The Wilke Family Foundation
$2,500 - $9,999
Mark Ashida and Lisbet Nilson
BNBuilders, Inc.
Sissy and Tom Bouchard
Covance, Inc.
Carole Ellison
Michael R. Flory
Douglas Howe and Robin DuBrin
Iverson Genetic Diagnostics, Inc.
KeyBank
Life Technologies Corporation
Dan Ling and Lee Obrzut
The Matale Line
Muckleshoot Charity Fund
J. Leighton and Carol Read
Salal Credit Union
Ron and Sara Seubert
Georges C. St. Laurent, Jr.
TD's of Clemson, Inc.
Thermo Fisher Scientific, Inc
Ian Tolmie and Jennifer Black
Touchstone Corporation
Tulalip Tribes Charitable Fund
University of Victoria
Vulcan Real Estate
Washington Research Foundation
The Adam J. Weissman Foundation
$1,000 - $2,499
AB Sciex LLC
Agilent Technologies, Inc.
John and Leslie Aitchison
Ray and Edith Aspiri
Nitin Baliga and Janet Ceballos
Dee Dickinson
Evergreen Associates, Ltd.
Jim and Sherry Ladd
Cammi Libby
Rob Lipshutz and Nancy Wong
Mike and Lisa Losh
Nick Newcombe
Northeastern University
Gil Omenn and Martha Darling
Pacific Science Center
Patti Payne
Project Lead the Way, Inc.
Carl and Carole Scandella
Cynthia Stroum
Aron and Sara Thompson
Thomas Weingarten and Wendy Thon
Qiang Tian and Danbin Xu
Washington State University
Carl and Rachael Weissman
Elaine and Larry Woo
$500 - $999
Bruker Daltonics, Inc.
Sherri Candelario
Roy and Mary Currence
Myron and Sue Hood
Allen and Nancy Jones
Inyoul Lee
Sid and Heather Logan
Jacques Peschon
Proteome Software, Inc.
Paula Rees
Dana and Ben Riley Black
Louis W. Roebke
Natasha Simkovich and Tim Hunt
Sorenson Ideas LLC
Bingyun Sun
$250 - $499
Bob Alexander
Katherine Barnett
Jimmy and Patty Barrier
JoAnn Chrisman
Michael Golden
Lynn and Michael Garvey
Drs. Hilde Cheroutre and Mitchell Kronenberg
Shirley LaFollette
Paul and Lucy Lange
B Lippit
Nathan and Brenda Price
Roke Foundation
Kevin Wheeler
$150 - $249
AH&T Insurance
Amgen Foundation
Michael Anderson
Marne Anderson
Rusti Brookes
Jane Chadsey
Jan Chalupny
Jennifer G. Dougherty
Terry Farrah
Richard Gelinas
Philip and Robyn Grad
Nancy Hutchison
Jeremy Johnson
Anne Johnson
John Kapernick
Sarah Li
Susan Marra
Carole and Gill McKinstry
Lyle and Nancy Middendorf
Gloria and George Northcroft
Christine and Steve Sample
Meena Selvakumar and John Mignone
Joel Shannon
Sally Goetz Shuler
Terri Skjei
Ethan Smith
Lynn Thorburn
Washington Alliance for Better Schools
Janis Wignall
Up to $149
Susan Adler
Anonymous
Naomi Bogenshutz
Mary Brunkow
Suzanne M. Burke
Hsiao-Ching Chou
Jeanne Ting Chowning
Margaret Cope
Jo Fiorito
Eddie Fisher
Thomas Israel
Bob and Rhoda Jensen
Tiffany Koenig and John Ostolaza
Kimberly Kotovic
Allison Kudla
Mary Beth Lambert
Roseann London
MaryBee and Bob Longabaugh
Up to $149 (cont'd)
Claudia and Adam Ludwig
Bruce and Joanne Montgomery
Gary Owen
Shizhen Qin
Carl Robinson
Norm Fox and Tracy Schmitz
The Seattle Foundation
Bryce Seidl
Christine Silva
Bob Sotak
William Stanford
Bobbie Stern
Shawn and Jeff Swift
Victoria VanBruinisse
Angela Walmsley
Sam Whiting
Rick and Ann Yoder

To demonstrate your belief in the promise of systems biology in 2014:

Publications2013 Aggregate

Journal publications serve as an important metric of success for our scientists. In 2013, we had many high-impact papers, including research published in top journals Nature, Cell and PLoS ONE.


Alphabetical Order By Publication Title